Showing posts with label Cool. Show all posts
Showing posts with label Cool. Show all posts

Sunday, April 4, 2010

Microbe Monday: Awesomely-strong glue

Its shape, adhesive properties, intricate cell-cycle regulation and asymmetric cell division are a just few of the reasons why Caulobacter crescentus is a well-studied microorganism (1). In nature, C. crescentus is typically found attached to submerged surfaces within aquatic environments via a stalk structure which protrudes from a single pole of the cell. An adhesive holdfast, located at the tip of the stalk (Fig. 1), composed of N-acetylglucosamine (sugar molecules) (Fig. 2) and other unknown substances exhibits the strongest adhesion force of any known natural material (2, 3, 4).
The majority of the C. crescentus life cycle is spent in the adherent stalked form. However, the early third of the life cycle is spent as a motile, swarmer cell (Fig. 1). It is hypothesized that the swarmer cells, which exhibit a single polar flagella, can explore new environments where nutrients are more plentiful. Once the flagella is shed, a stalk and holdfast are synthesized in the same location and promote adherence to a surface. Stalked cells undergo cell division and produce new swarmer cells, which begin the process anew (Fig. 1)(1, 5).


Figure 1. C. crescentus undergoing cell division. The stalked cell is located on the top, with the stalk and holdfast at the top of the frame. The swarmer cell is located underneath such that the flagella is protruding toward the bottom right-hand corner of the image. (This image was obtained from MicrobeWiki courtesy of Yves Brun.)

The glue: What is it and how strong is it?
In addition to other unknown elements, the holdfast is composed of oligomers of N-acetylglucosamine (Fig. 2). Treatment of the holdfast with lysozyme, an enzyme that will cleave N-acetylglucosamine oligomers, reduces the adhesive force to less than 10% (3, 4). Furthermore, C. crescentus mutants lacking the sugar molecules at the tip exhibit a significant adherence defect. It was determined that the force required to remove C. crescentus from a glass surface is over 70 Newtons per square millimeter or 5 tons per square inch (2). This force is equivalent to the downward force exerted by three cars balancing on a quarter (6).

Figure 2. N-acetylglucosamine monomer (a.k.a GlcNac, NAG).

That's pretty cool, but why should anyone care?
Unlike superglue, the adhesive substance produced by C. crescentus is non-toxic and it adheres well under water, both the fresh and salt varieties. Potential applications include, biodegradable surgical and dental adhesives and repair of surfaces exposed to water (2, 6). Furthermore, studying adherence of C. crescentus should provide insight into biofouling and biofilm formation (2).

Why so sticky?
It is thought that in its natural environment, C. crescentus attached near the surface of water must contend with the passage of waves at the air-liquid interface, which exerts a significant force (2).

References:
(1) Brown et al. Complex regulatory pathways coordinate cell cycle progression and development in Caulobacter crescentus. Adv Microb Physiol. 2009; 54:1-101.

(2) Tsang et al Adhesion of Single Bacterial Cells in the Micronewton Range. PNAS. 2006; 103(15):5764-5768.

(3) Smith et al Identification of Genes Required For Synthesis of the Adhesive Holdfast in Caulobacter crescentus. J. Bacteriol. 2003; 185:1432-1442.

(4) Li et al. The Elastic Properties of the Caulobacter crescentus Adhesive Holdfast are dependent on Oligomers of N-Acetylglucosamine. J. Bacteriol. 2005; 187(1):257-265.

(5) Jenal. The Role of Proteolysis in the Caulobacter crescentus Cell Cycle and Development. Research in Microbiology 2009; 160:687-695.

(6) Iddo Genuth & Lucille Fresco-Cohen. Nature's Superglue The Future of Things (2006)

Monday, March 8, 2010

Microbe Monday: Way cooler than an ant farm.

As a child, I did not own an ant farm. I thought they were pretty cool, but there was something about keeping a colony of ants in the house that just didn't sit to well with my mother. I did own Sea Monkeys, but I accidentally boiled them to death in the window.* Anyway, I think I found something even more cool than an ant farm or sea monkeys. While perusing the ASM website, I decided to check out the 2009 Editor's Choice Award Winners, where I found the video: "Mud and Microbes: A Time-lapse Photographic Exploration of a Sediment Bacterial Community."
Using a combination of time-lapse photography, light, an adaptation of a Winogradsky column, sediment from a pond, finely-shredded paper towels, calcium carbonate and magnesium sulfate, the participants created a simple, yet fascinating way to get a peek at microorganisms in the soil and sediment. The creators of the following video hope that it will serve as a catalyst to discuss microbial ecology and microorganism dynamics in the world around us and to increase increase interest in the study of soil microorganisms in nutrient cycling.
The video is composed of stills taken over the 40 day experiment and the progression clearly demonstrates how phototropic microbes with differing metabolic capabilities respond to the nutrients and light.




In a longer version of the video the narrator informs us that the bottom area of the plates become anaerobic, favoring reducing conditions where sulfate-reducing and cellulose-degrading bacteria proliferate. The black color is iron sulfide. (Note: the shredded paper towels are located in the bottom of the "mud column.") He goes on to describe that the pink/purple areas near the bottom are likely populated by purple, nonsulfur proteobacteria, the green patches likely represent green and purple sulfur proteobacteria, while the green at the very top is most likely green algae and/or cyanobacteria. It is important to note that the bacteria from this experiment were not isolated or typed and these descriptions are just best guesses.

Anyway. I kinda want to make one of these, take samples and look at them under the scope.

*Portions of the Sea Monkey "aquarium" contained magnifying glass that would enlarge the Sea Monkey as it swam by, allowing one to see that the tiny things swimming around in that container didn't actually look like monkeys. Sun, water and magnifying glass is apparently a deadly combination for a Sea Monkey.


Authors
Michael Lemke
Microbial Ecology
University of Illinois at Springfield
Springfield, IL 62701
USA
Email: mlemk1@uis.edu

Roza George
Department of Microbiology
University of Georgia

Keith Miller
Department of Computer Science
University of Illinois at Springfield
Springfield, IL 62703-507

References:
1. Charlton, P. J., J. E. McGrath, and C. G. Harfoot. 1997. The Winogradsky plate, a convenient and efficient method for enrichment of anoxygenic phototrophic bacteria. J. Microbiol. Methods 30:161–163.
2. Couger, G. 2002. Habitat for lab specimens and other uses for common household items.http://www.microscopy-uk.org.uk/mag/artaug02/gchabitat.htm.
3. Rogan, B., M. Lemke, M. Levandowsky, and T. Gorrell. 2005. Exploring the sulfur nutrient cycle using the Winogradsky column. Am. Biol. Teacher67:279–287.
Music.
Barbara Schubert and theUniversity of Chicago Orchestra performed Richard Straus’s Also Sprach Zarathurstra,http://www.archive.org/details/uso20000527. Creative Commons license: attribution, noncommercial, no derivative works.

Tuesday, November 25, 2008

Even better than jumbo shrimp

What could this be? A giant amoeba a.k.a. Gromia sphaerica. (I wanted to blog about this earlier, but I've been chained to the bench.)

Mikhail “Misha” Matz, an associate professor at the University of Texas at Austin, discovered this amoeba species while in the Bahamas.* Previously, this species had only been located in the Arabian Sea. 

What is so cool about G. sphaerica?
1. It is the size of a grape. A FREAKING GRAPE people.
2. It leaves a trail. It is hypothesized that while rolling along the ocean floor G. sphaerica pick up sediment in front and then discharge the sediment in the back, subsequently leaving trails. 
3. Ancestors of this "sea grape" may be responsible for fossil tracks present in "ancient mud." According to the New Scientist article, some of the tracks predate the evolution of multicellular life, making an ancient large protozoan a possible candidate.
4. Did I mention that it is the size of a grape? I am completely fascinated and I am pretty sure that I need one. What? People keep fish. I want a sea grape!

I highly recommend checking out the paper. There pictures are great. It looks like there are herds of these amoebas moving along the floor. 

*Yes, while the rest of us were toiling away in the lab, surrounded by concrete and foul chemicals, this lucky bastard was in the Bahamas .

Current Biology (DOI: 10.1016/j.cub.2008.10.028)

The New Scientist